Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2931
Parameters: 2 7 7 80 10 50 1000
Length:  49831

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19723--19763
22
1.9
21
85
5
55
14
41
26
17
1.88
23839--23880
21
2.0
22
86
13
61
35
9
21
33
1.86
28132--28204
38
1.9
38
100
0
146
30
16
21
31
1.95
35260--35509
51
4.9
51
91
2
405
28
25
14
32
1.95
35542--35614
24
3.0
24
94
4
121
26
19
16
38
1.92
40634--40700
20
3.3
20
87
0
98
31
11
23
32
1.91
40752--40830
24
3.3
24
89
3
115
26
20
25
27
1.99
40752--40840
24
3.7
23
85
5
108
25
22
25
25
2.00
41034--41097
31
2.1
31
90
0
101
35
15
23
25
1.94
48554--48601
25
1.9
25
86
0
69
33
25
16
25
1.96
48640--48688
20
2.6
18
81
12
62
34
12
18
34
1.88
48645--48684
20
2.0
20
100
0
80
35
10
20
35
1.86
48734--48831
23
4.1
23
91
7
160
27
20
20
31
1.97
48734--48831
47
2.1
47
94
1
169
27
20
20
31
1.97
48733--48852
25
5.0
24
87
7
172
27
20
21
30
1.98
49044--49106
30
2.1
31
90
3
101
36
15
23
23
1.94

Tables:   1

The End!