Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3405
Parameters: 2 7 7 80 10 50 1000
Length:  28675

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6656--6833
27
6.6
26
80
6
169
26
16
28
28
1.97
6657--6812
82
1.9
81
86
3
224
26
16
28
28
1.97
6653--6833
82
2.2
81
82
2
220
27
16
28
28
1.97
6738--6844
27
3.9
27
81
1
79
26
15
28
28
1.96
14941--14994
21
2.5
21
81
3
63
18
37
31
12
1.89
17346--17379
12
2.8
12
86
4
50
47
29
2
20
1.65
19592--19763
79
2.2
78
83
7
213
25
22
28
24
1.99
19539--19761
40
5.6
39
79
7
207
25
21
27
24
1.99
19619--19796
79
2.2
80
82
3
200
25
22
28
23
1.99
27100--27323
40
5.7
40
81
7
233
25
21
28
25
1.99
27100--27323
79
2.8
78
81
6
245
25
21
28
25
1.99
27180--27356
79
2.3
79
82
4
198
25
22
28
24
1.99

Tables:   1

The End!