Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1754
Parameters: 2 7 7 80 10 50 1000
Length:  25897

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1736--2005
46
5.8
45
78
11
235
24
29
18
27
1.98
1736--2004
93
2.9
93
80
7
287
24
29
18
27
1.98
6493--6563
34
2.1
34
97
0
133
30
26
9
32
1.89
8879--9067
50
3.8
50
80
3
193
28
25
18
26
1.98
8892--9078
101
1.9
99
82
2
239
28
27
17
26
1.98
13667--13861
51
3.8
51
87
1
284
29
25
11
33
1.91
13885--14026
52
2.7
53
84
12
186
24
24
14
36
1.93
13885--14028
28
5.4
27
83
12
192
25
25
13
36
1.93
15505--15680
46
3.8
46
76
12
198
21
20
28
29
1.98
15502--15673
93
1.8
93
93
0
299
21
20
29
28
1.98
23043--23218
46
3.8
46
79
12
216
20
21
29
28
1.98
23040--23211
93
1.8
93
96
0
317
20
21
29
27
1.98

Tables:   1

The End!