Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2428
Parameters: 2 7 7 80 10 50 1000
Length:  42742

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7198--7280
30
2.7
30
81
9
89
13
21
1
63
1.35
7231--7286
18
3.1
18
76
5
51
7
19
3
69
1.27
7256--7280
12
2.1
12
100
0
50
8
16
0
76
1.02
7349--7405
5
11.0
5
75
20
55
3
17
1
77
1.00
7349--7405
16
3.7
14
82
15
60
3
17
1
77
1.00
7347--7416
20
3.3
20
73
18
63
4
18
1
75
1.04
10802--10845
22
2.0
22
95
0
79
25
36
4
34
1.76
11529--11625
30
3.2
30
77
2
115
28
15
26
28
1.96
12364--12420
11
5.5
10
73
22
55
77
1
17
3
1.00
12364--12420
5
11.0
5
77
17
55
77
1
17
3
1.00
12364--12420
16
3.7
14
80
17
60
77
1
17
3
1.00
16229--16275
20
2.3
20
85
0
67
29
36
12
21
1.91
25065--25289
40
5.6
40
79
11
205
25
26
21
26
1.99
25065--25283
80
2.7
80
80
12
243
26
25
20
27
1.99
28494--28537
22
2.0
22
100
0
88
36
4
36
22
1.75
29928--30024
30
3.2
31
73
5
101
27
28
14
28
1.95
33791--33837
20
2.3
20
85
0
67
29
36
12
21
1.91
37649--37697
20
2.4
21
83
10
66
30
34
12
22
1.91
41176--41213
17
2.2
18
85
4
51
10
23
2
63
1.39

Tables:   1

The End!