Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1293
Parameters: 2 7 7 80 10 50 1000
Length:  27666

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1639--1746
32
3.4
31
75
13
94
34
20
21
24
1.97
1720--1822
27
3.8
27
75
3
82
40
20
17
21
1.91
2259--2527
81
3.3
81
78
10
266
32
8
18
39
1.82
2233--2526
27
10.9
27
77
12
225
32
9
18
39
1.82
6746--6775
15
1.9
16
93
6
53
36
13
0
50
1.42
9519--9659
39
3.6
40
90
4
216
24
21
27
26
1.99
17482--17664
40
4.6
40
91
4
291
22
21
27
27
1.99
17478--17664
78
2.4
80
91
3
308
24
21
27
27
1.99
17478--17696
78
2.8
77
87
6
287
25
21
26
26
1.99
17923--17965
22
2.0
21
82
17
52
32
16
13
37
1.88
19889--19948
30
2.0
29
83
3
75
31
25
6
36
1.82
25237--25339
45
2.3
44
85
11
129
25
21
31
22
1.98

Tables:   1

The End!