Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold536
Parameters: 2 7 7 80 10 50 1000
Length:  13440

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5449--5527
37
2.1
37
88
4
115
25
30
18
25
1.98
5646--6118
47
10.1
47
96
0
831
28
30
9
31
1.88
9791--9926
40
3.5
40
86
4
195
26
26
20
26
1.99
10322--10400
29
2.7
29
86
5
106
27
32
15
24
1.95
10382--10483
43
2.4
43
98
1
197
26
35
15
22
1.94
12314--12392
37
2.1
37
88
4
115
25
30
18
25
1.98
12511--12914
47
8.7
47
93
2
665
28
30
8
31
1.87
12632--12705
22
3.3
22
64
17
62
28
31
10
29
1.91
12511--13038
94
5.5
94
89
6
805
28
30
8
32
1.88
12901--12928
14
2.0
14
100
0
56
28
35
0
35
1.58
12856--12975
59
2.0
60
96
3
224
29
31
6
32
1.83
12762--13038
153
1.8
151
96
1
509
28
29
8
32
1.87
12915--13038
47
2.7
47
97
2
234
28
29
9
32
1.89
12809--13020
106
2.0
105
93
3
363
29
30
7
33
1.85

Tables:   1

The End!