Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold870
Parameters: 2 7 7 80 10 50 1000
Length:  46754

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3352--3572
39
5.6
39
86
5
259
27
27
20
24
1.99
3350--3572
79
2.8
78
85
3
277
27
27
20
24
1.99
11219--11440
40
5.6
40
87
4
263
26
27
20
25
1.99
11217--11440
79
2.8
78
84
4
270
26
27
20
25
1.99
11219--11440
119
1.9
119
83
5
288
26
27
20
25
1.99
13681--13714
18
1.9
18
88
5
52
41
11
17
29
1.85
15937--16006
35
2.0
35
100
0
140
25
20
17
37
1.94
19644--19783
54
2.6
54
89
4
221
27
19
16
37
1.93
19623--19783
27
6.0
27
77
5
155
26
21
17
34
1.95
19626--19775
81
1.9
81
85
0
210
26
21
18
34
1.96
19822--19971
27
5.6
27
79
6
108
32
9
19
39
1.83
22453--22490
19
2.0
20
89
5
60
18
2
2
76
1.02
26534--27155
48
12.9
48
92
3
962
34
5
28
30
1.81
31887--31918
16
2.0
16
93
0
55
43
15
25
15
1.86
32090--32178
28
3.1
28
85
6
108
23
13
32
30
1.93
36077--36146
28
2.5
28
90
4
106
27
12
27
32
1.93
46120--46189
28
2.5
28
90
4
106
27
12
27
32
1.93

Tables:   1

The End!