Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold797
Parameters: 2 7 7 80 10 50 1000
Length:  70862

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6035--6189
27
5.7
27
77
6
136
27
28
16
28
1.97
13075--13224
53
2.8
54
80
9
173
28
16
27
27
1.97
13076--13229
27
5.7
26
78
9
132
27
16
27
27
1.97
21185--21254
28
2.6
27
86
2
86
28
20
28
22
1.98
21130--21281
55
2.8
53
81
4
178
28
16
27
26
1.97
21131--21286
27
5.7
27
78
6
145
28
16
28
27
1.97
23278--23604
48
6.8
48
81
0
332
28
26
16
28
1.97
29095--29298
92
2.2
91
81
6
261
31
19
19
29
1.96
32803--32855
25
2.2
24
86
3
70
18
24
18
37
1.94
35423--35448
9
2.9
9
100
0
52
11
0
23
65
1.25
36148--36278
50
2.7
49
80
4
140
26
19
25
29
1.98
36148--36325
98
1.8
98
80
4
216
25
18
26
29
1.98
40899--40964
31
2.1
31
100
0
132
33
13
18
34
1.90
47088--47265
48
3.7
48
76
8
146
27
20
24
27
1.99
50967--51117
53
2.8
53
89
4
214
29
27
16
25
1.97
58488--58627
53
2.6
53
86
2
192
28
27
18
25
1.98
63377--63589
46
4.6
47
81
5
209
23
30
17
27
1.97
63373--63589
47
4.6
46
79
10
201
23
30
17
27
1.97
63425--63622
46
4.2
46
81
10
179
24
30
18
27
1.98
64977--65161
79
2.3
82
84
7
238
25
27
22
24
2.00
64958--65161
40
5.1
40
82
8
238
25
27
22
25
2.00

Tables:   1

The End!