Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3307
Parameters: 2 7 7 80 10 50 1000
Length:  30421

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4088--4134
20
2.3
20
81
0
58
23
12
34
29
1.92
6959--6994
10
3.8
9
89
10
54
2
8
2
86
0.77
7512--7544
4
8.0
4
96
3
57
24
0
0
75
0.80
14937--14990
20
2.7
20
82
0
63
24
20
18
37
1.94
14937--15010
30
2.5
30
86
8
98
21
20
18
39
1.93
14937--15001
20
3.2
20
71
16
53
23
21
16
38
1.93
23142--23195
24
2.2
25
78
15
60
11
22
3
62
1.43
25446--25474
14
2.1
14
100
0
58
13
6
6
72
1.26
25451--25494
20
2.1
21
91
4
72
9
4
4
81
0.96
25452--25521
12
5.8
12
69
27
51
12
8
4
74
1.20
25475--25524
26
1.9
26
88
8
75
18
10
6
66
1.42
25450--25516
35
1.9
35
81
0
80
14
7
4
73
1.22
29386--29441
20
2.8
20
80
0
67
80
3
7
8
1.01
29386--29440
19
2.8
20
76
15
60
80
3
7
9
1.02

Tables:   1

The End!