Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3240
Parameters: 2 7 7 80 10 50 1000
Length:  26666

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2609--2656
19
2.5
20
73
13
55
41
0
2
56
1.11
9099--9202
52
2.0
52
98
0
199
50
16
15
18
1.79
9623--9657
15
2.3
15
85
0
52
62
5
17
14
1.49
9829--9975
72
2.0
72
92
0
240
29
10
17
42
1.82
22771--22807
2
18.5
2
100
0
74
51
0
48
0
1.00
25902--25940
21
1.9
20
89
5
60
64
0
2
33
1.08
25900--25947
20
2.3
21
78
3
62
56
0
2
41
1.11
25938--25977
20
2.0
20
100
0
80
30
0
0
70
0.88
25969--26016
1
48.0
1
87
0
60
8
0
0
91
0.41
25968--26017
16
3.1
16
94
2
82
12
0
0
88
0.53
26057--26082
13
2.0
13
100
0
52
23
0
0
76
0.78
26163--26209
19
2.4
19
85
7
58
21
0
0
78
0.75
26176--26214
19
2.0
20
95
5
71
12
0
0
87
0.55
26174--26203
15
2.0
15
100
0
60
13
0
0
86
0.57
26272--26310
14
2.6
16
84
8
55
28
0
2
69
1.02
26443--26503
15
3.9
16
72
12
56
37
0
0
62
0.96
26453--26512
30
2.0
30
84
15
79
33
0
0
66
0.92

Tables:   1

The End!