Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2754
Parameters: 2 7 7 80 10 50 1000
Length:  22121

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
495--548
20
2.7
20
82
0
63
24
20
18
37
1.94
495--568
30
2.5
30
86
8
98
21
20
18
39
1.93
495--559
20
3.2
20
71
16
53
23
21
16
38
1.93
2182--2256
40
2.0
36
85
12
98
72
5
14
8
1.26
3279--3339
15
4.2
14
76
17
54
73
0
16
9
1.08
3355--3417
33
1.9
33
84
12
85
55
6
25
12
1.60
5626--5816
78
2.5
78
89
4
282
28
28
19
23
1.99
5645--5830
40
4.8
40
78
10
208
27
28
20
23
1.99
6734--6806
29
2.5
30
88
6
105
21
20
19
38
1.94
8424--8477
13
4.1
13
77
11
56
75
1
12
9
1.11
9473--9559
6
14.2
6
70
13
52
74
0
17
8
1.04
9473--9516
19
2.2
20
88
4
63
81
0
15
2
0.78
9477--9577
27
3.7
28
79
11
102
73
0
16
8
1.14
9472--9559
17
5.5
17
71
23
57
73
0
17
9
1.07
9574--9636
33
1.9
33
84
12
85
55
6
25
12
1.60
11411--11464
20
2.7
20
82
0
63
24
20
18
37
1.94
11411--11484
30
2.5
30
86
8
98
21
20
18
39
1.93
11411--11475
20
3.2
20
71
16
53
23
21
16
38
1.93
19989--20198
40
5.3
39
82
7
255
27
28
20
23
1.99
19989--20198
79
2.7
80
90
3
336
27
28
20
23
1.99

Tables:   1

The End!