Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2468
Parameters: 2 7 7 80 10 50 1000
Length:  34254

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
704--789
40
2.2
40
89
0
127
25
23
27
23
2.00
2418--2568
27
5.6
27
84
1
196
25
12
20
41
1.87
2418--2568
54
2.8
54
86
4
216
25
12
20
41
1.87
2891--2930
18
2.2
18
86
0
53
27
20
12
40
1.88
8521--8582
25
2.5
25
76
10
72
24
20
22
32
1.98
8691--8717
13
2.1
13
100
0
54
29
0
22
48
1.51
9818--9991
43
4.1
42
75
11
174
24
16
24
33
1.96
9834--9989
85
1.8
84
86
4
224
25
17
25
32
1.97
11810--11920
27
4.2
26
87
3
132
39
22
23
14
1.91
11810--11920
54
2.1
53
86
5
152
39
22
23
14
1.91
19541--19649
27
4.1
27
88
5
150
37
22
24
14
1.92
24735--24788
24
2.2
24
83
6
65
68
3
1
25
1.16
24724--24771
18
2.6
19
80
12
55
66
6
2
25
1.26
26590--27425
83
10.1
83
95
0
1420
25
20
20
32
1.97

Tables:   1

The End!