Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1122
Parameters: 2 7 7 80 10 50 1000
Length:  28111

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2674--2758
43
2.0
44
86
9
122
45
3
4
45
1.41
3370--3414
8
5.1
8
82
17
54
28
0
0
71
0.87
3355--3415
10
6.4
10
77
11
74
31
0
0
68
0.89
3433--3489
26
2.2
26
81
9
64
29
1
5
63
1.27
4352--4441
31
2.9
31
82
12
114
45
2
20
32
1.63
8183--8232
23
2.2
23
92
0
82
42
24
18
16
1.89
8351--8415
26
2.5
26
85
7
80
35
20
20
24
1.96
10756--10929
64
2.8
65
82
8
200
40
17
8
33
1.79
11007--11049
21
2.0
22
86
13
63
41
16
0
41
1.48
18605--18785
64
2.9
65
80
11
216
40
17
7
34
1.77
18859--18901
21
2.0
22
86
13
63
41
16
0
41
1.48
19480--19533
28
1.9
28
85
7
74
35
16
3
44
1.66
24315--24399
43
2.0
44
86
9
122
45
3
4
45
1.41
24586--24631
13
3.1
15
76
17
60
63
0
0
36
0.95
25009--25053
8
5.1
8
82
17
54
28
0
0
71
0.87
24994--25054
10
6.4
10
77
11
74
31
0
0
68
0.89
25072--25128
26
2.2
26
81
9
64
29
1
5
63
1.27
26006--26086
31
2.6
31
88
9
114
48
1
18
32
1.56

Tables:   1

The End!