Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3511
Parameters: 2 7 7 80 10 50 1000
Length:  45426

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10634--10779
68
2.1
68
94
0
256
25
29
13
31
1.94
10634--10805
68
2.5
66
83
9
229
24
27
13
34
1.93
12295--12608
27
11.6
27
85
0
385
39
20
8
31
1.82
12295--12680
54
7.1
54
83
1
425
39
20
9
31
1.84
12295--12669
27
13.9
27
79
6
298
38
20
9
31
1.84
12592--12717
27
4.7
26
75
5
81
36
23
9
30
1.87
12701--12976
27
10.3
27
86
0
338
33
18
22
25
1.97
13403--13467
22
3.0
22
80
8
78
20
23
23
33
1.97
13648--13699
27
1.9
27
92
0
86
19
25
21
34
1.96
13847--13903
19
3.4
19
66
31
56
19
15
15
49
1.80
13836--13903
31
2.2
32
94
2
120
19
14
14
51
1.76
24151--24296
68
2.1
68
98
0
283
24
29
14
31
1.94
27331--27442
43
2.6
42
80
5
136
33
17
20
28
1.96
32167--32359
40
4.8
40
88
1
271
23
20
29
26
1.99
32167--32385
40
5.5
40
86
3
167
24
21
28
25
1.99
37312--37632
47
6.8
47
93
3
563
30
29
8
32
1.86
37312--37632
96
3.4
96
96
1
585
30
29
8
32
1.86
41032--41219
40
4.8
40
85
3
238
26
28
20
24
1.99
41141--41205
22
3.2
22
62
20
59
24
30
21
23
1.99
41039--41219
79
2.3
79
82
2
220
27
28
20
23
1.99
42417--42493
37
2.1
35
88
4
109
24
31
19
24
1.98
42608--43632
47
21.9
47
90
5
1609
29
28
8
33
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42608--43632
233
4.4
234
91
5
1605
29
28
8
33
1.86
42608--43632
280
3.7
281
91
4
1643
29
28
8
33
1.86

Tables:   1

The End!