Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1393
Parameters: 2 7 7 80 10 50 1000
Length:  36433

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6327--6481
27
5.7
27
83
7
152
29
29
14
27
1.95
6327--6481
55
2.9
54
82
2
168
29
29
14
27
1.95
6327--6492
54
3.1
53
83
4
181
28
28
15
27
1.96
12432--12655
104
2.2
104
93
1
378
17
19
31
31
1.95
12574--12725
71
2.1
72
92
1
252
23
17
29
30
1.97
24569--24626
30
1.9
30
89
0
89
34
10
25
29
1.89
26452--26643
40
4.8
40
92
1
226
27
27
21
23
1.99
26423--26642
80
2.8
80
81
4
248
28
27
20
23
1.99
33379--33403
13
1.9
13
100
0
50
24
8
0
68
1.16
34542--34717
38
4.8
38
80
15
169
26
28
20
24
1.99
34539--34716
76
2.5
69
83
9
198
26
29
20
23
1.99

Tables:   1

The End!