Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold618
Parameters: 2 7 7 80 10 50 1000
Length:  64484

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6392--6448
22
2.4
24
85
8
73
15
21
28
35
1.94
13802--13898
23
4.3
23
87
9
146
32
25
20
20
1.97
13809--13898
43
2.0
45
93
4
157
33
25
21
20
1.97
21156--21253
23
4.3
23
90
2
162
31
26
21
20
1.98
21163--21251
45
2.0
45
95
0
160
31
26
22
19
1.97
23042--23152
47
2.4
47
83
6
145
36
22
14
26
1.92
23912--24008
42
2.3
43
86
10
139
7
26
6
59
1.47
26209--26242
13
2.7
13
90
4
52
44
0
0
55
0.99
31389--31413
12
2.1
12
100
0
50
28
8
24
40
1.83
32707--32776
16
4.2
16
80
14
79
58
2
0
38
1.13
34394--34436
11
3.9
11
75
0
50
67
0
32
0
0.91
34890--34936
19
2.5
19
92
0
76
4
0
25
70
1.05
34886--34941
18
2.9
19
92
7
87
3
0
30
66
1.09
35688--35925
78
3.1
77
80
9
261
33
18
17
29
1.95
46070--46238
90
1.9
87
85
3
230
21
17
21
38
1.93
46207--46251
13
3.4
13
84
6
63
13
8
6
71
1.31
46207--46252
14
3.4
14
78
6
58
13
8
6
71
1.29
46145--46424
101
2.8
100
87
4
386
23
17
19
39
1.92
46422--47965
148
9.7
147
73
18
840
30
16
18
33
1.94
46422--46956
75
7.3
75
85
3
651
30
15
19
34
1.93
46866--47138
91
3.1
90
78
7
272
26
17
18
37
1.93
47027--47059
14
2.4
14
94
0
57
18
12
6
63
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47041--47451
75
5.2
75
77
16
359
30
17
18
33
1.94
47440--47474
14
2.5
14
85
0
52
20
17
2
60
1.49
47455--47629
75
2.3
74
89
1
251
32
16
17
33
1.92
47778--47812
14
2.5
14
95
0
61
20
20
2
57
1.54
47543--48345
88
9.5
84
76
13
652
31
16
18
33
1.94
47792--47967
75
2.3
75
90
2
273
31
16
17
34
1.92
48115--48149
14
2.5
14
95
0
61
20
20
2
57
1.54
47118--48257
338
3.4
337
95
0
2034
31
17
18
33
1.94
49556--49587
15
2.0
17
88
11
50
31
0
6
62
1.20
50188--50232
17
2.6
18
89
10
76
31
8
8
51
1.64
51596--51631
12
3.0
12
87
0
54
25
27
5
41
1.77
51604--51635
16
1.9
17
93
6
57
25
28
6
40
1.79
58138--58183
19
2.5
19
89
3
67
45
8
15
30
1.76
59483--59525
1
43.0
1
80
0
50
90
4
2
2
0.59
61692--62015
78
4.3
76
74
21
279
30
23
15
30
1.96

Tables:   1

The End!