Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3740
Parameters: 2 7 7 80 10 50 1000
Length:  56116

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1545--1669
48
2.7
46
86
4
178
31
28
19
21
1.97
1547--1691
48
3.1
45
78
9
114
30
28
20
21
1.98
7348--7469
46
2.7
46
90
0
190
30
27
20
21
1.98
7346--7488
46
3.1
45
82
6
128
30
27
20
21
1.98
13235--13485
126
2.0
126
98
0
484
34
15
24
25
1.95
13817--14188
48
7.8
48
75
2
316
22
28
22
25
1.99
13865--14194
96
3.4
96
89
0
500
23
29
22
25
1.99
15578--15618
18
2.3
18
95
0
73
46
14
4
34
1.66
16441--16604
42
3.9
42
80
6
179
27
25
15
31
1.95
17203--17301
49
2.0
49
96
0
180
48
15
10
26
1.76
18359--18423
29
2.2
29
83
0
85
29
23
21
26
1.99
19353--19446
48
2.0
48
91
4
154
31
28
15
23
1.96
20150--20188
21
1.9
20
84
5
51
46
17
2
33
1.62
36969--37075
40
2.7
40
94
0
178
30
26
20
22
1.98
43710--43886
40
4.4
40
83
4
225
25
27
22
24
2.00
46918--47101
40
4.6
40
82
6
196
23
20
27
28
1.99
46918--47098
80
2.3
81
83
9
221
23
20
27
27
1.99
46999--47148
40
3.8
38
80
8
122
24
22
28
24
1.99
55120--55247
39
3.3
40
81
5
145
25
21
25
28
1.99

Tables:   1

The End!