Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2606
Parameters: 2 7 7 80 10 50 1000
Length:  55672

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
992--1032
15
2.6
16
84
3
57
63
14
9
12
1.52
14399--14536
51
2.8
49
85
2
186
31
23
18
26
1.98
25059--25186
46
2.8
46
79
12
147
23
20
26
29
1.99
27869--27905
18
2.0
18
89
5
56
16
16
43
24
1.87
35894--36096
40
5.1
40
84
5
252
24
23
28
24
2.00
37359--37518
85
1.9
88
79
11
190
30
18
21
28
1.97
39115--39154
19
2.1
19
100
0
80
27
32
15
25
1.95
46094--46122
15
1.9
15
100
0
58
24
6
20
48
1.74
47340--47557
40
5.4
40
80
8
228
25
23
27
23
2.00
47340--47557
80
2.7
79
82
3
256
25
23
27
23
2.00
55444--55535
38
2.4
38
85
8
134
23
27
23
25
2.00

Tables:   1

The End!