Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1640
Parameters: 2 7 7 80 10 50 1000
Length:  55387

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2306--2544
38
6.5
39
75
19
212
24
26
22
26
2.00
2316--2507
75
2.7
69
83
13
225
25
26
21
27
1.99
2849--2927
29
2.7
29
86
5
106
27
32
15
24
1.95
2909--3011
43
2.4
43
100
0
206
26
35
15
22
1.94
4873--4951
37
2.1
37
88
4
115
25
30
18
25
1.98
5070--5480
47
8.7
47
96
1
745
29
29
8
32
1.87
10951--10999
17
2.7
18
81
9
55
34
2
0
63
1.06
14135--14278
75
1.9
75
94
0
252
25
15
29
29
1.96
16116--16205
25
3.6
25
77
1
92
24
15
22
37
1.93
17909--18075
42
3.9
42
77
6
156
28
17
25
28
1.98
20399--20460
21
3.2
21
60
21
53
24
1
25
48
1.60
20387--20461
37
2.0
37
100
0
150
24
2
21
52
1.60
47160--47230
27
2.7
26
71
8
63
22
18
16
42
1.89
47219--47278
23
2.6
23
78
5
59
23
25
18
33
1.97
52762--52845
43
2.0
43
88
4
125
30
28
15
25
1.96

Tables:   1

The End!