Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2017
Parameters: 2 7 7 80 10 50 1000
Length:  54314

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4786--4962
27
6.6
27
84
4
180
30
28
12
28
1.94
4786--4962
54
3.3
54
83
7
200
30
28
12
28
1.94
4807--4961
81
1.9
81
83
7
199
29
28
13
28
1.94
8049--8220
93
1.8
93
94
0
308
27
28
21
22
1.99
8042--8217
46
3.8
46
76
12
198
28
28
21
21
1.98
8050--8236
46
4.0
45
72
18
134
28
28
20
22
1.99
29352--29527
51
3.5
51
84
0
174
26
17
26
29
1.98
29431--29572
51
2.8
51
84
4
171
28
16
27
28
1.97
30763--30797
17
2.1
17
100
0
70
31
5
28
34
1.81
38205--38449
40
6.2
40
93
4
356
23
22
27
26
2.00
42890--43075
40
4.7
40
87
5
234
26
27
21
24
1.99
52705--52906
39
5.2
40
91
5
290
23
22
28
25
1.99

Tables:   1

The End!