Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1363
Parameters: 2 7 7 80 10 50 1000
Length:  53965

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1834--2014
40
4.6
39
81
9
165
23
20
27
27
1.99
1887--2014
39
3.3
39
83
8
163
23
20
28
28
1.99
9703--9885
40
4.6
40
81
8
187
24
20
27
27
1.99
9703--9882
79
2.3
81
83
8
219
23
21
27
27
1.99
9783--9932
39
3.8
39
81
7
117
24
22
28
24
1.99
9756--9922
79
2.1
79
82
4
194
24
20
28
26
1.99
13901--14025
45
2.8
45
80
4
146
25
14
24
35
1.93
16785--16828
15
2.9
15
79
0
52
11
11
20
56
1.64
21293--21403
45
2.5
45
80
5
127
42
16
19
21
1.89
21383--21412
6
5.0
6
95
0
51
50
13
16
20
1.78
21596--21663
21
3.3
21
68
15
61
38
20
8
32
1.84
22558--22589
3
10.7
3
100
0
64
65
0
0
34
0.93
22626--22683
24
2.4
24
83
11
66
27
15
5
51
1.64
43632--43706
6
12.3
6
72
8
62
45
17
16
21
1.85
43687--43790
45
2.3
45
88
6
158
44
19
15
21
1.87
44614--44674
30
2.0
30
90
0
95
37
8
24
29
1.84

Tables:   1

The End!