Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1571
Parameters: 2 7 7 80 10 50 1000
Length:  51734

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2970--3029
1
60.0
1
88
0
84
3
93
1
1
0.45
2970--3029
18
3.3
18
86
13
95
3
93
1
1
0.45
2969--3029
31
2.0
31
93
6
106
3
91
1
3
0.53
9254--9474
40
5.6
41
79
11
230
24
24
27
23
2.00
14352--14457
56
1.9
56
96
0
194
30
13
10
46
1.76
18732--18956
40
5.7
39
85
3
254
25
28
22
23
2.00
18732--18916
79
2.3
80
88
2
266
25
27
22
23
2.00
26979--27203
40
5.7
39
86
3
272
24
27
23
24
2.00
30035--30088
27
2.0
27
100
0
108
37
14
18
29
1.91
35855--35908
21
2.5
21
84
3
63
16
35
31
16
1.92
43247--43469
39
5.6
40
83
9
260
24
23
27
25
2.00
43247--43443
82
2.4
81
88
6
285
23
22
28
24
1.99
43292--43469
82
2.2
81
88
4
229
23
23
28
24
1.99
51204--51428
40
5.6
40
86
8
296
24
23
28
24
2.00
51204--51401
82
2.4
83
90
5
307
23
22
29
24
1.99

Tables:   1

The End!