Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold886
Parameters: 2 7 7 80 10 50 1000
Length:  50479

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9939--9993
25
2.3
23
78
12
58
43
3
16
36
1.65
10049--10123
22
3.3
22
72
17
62
60
6
4
29
1.41
10055--10180
25
4.9
25
72
14
78
58
5
6
29
1.45
10104--10175
27
2.6
28
73
8
67
61
4
6
27
1.41
10140--10267
23
5.5
23
68
15
59
56
2
5
35
1.35
10546--10584
16
2.4
16
86
0
51
43
28
5
23
1.75
10743--10840
30
3.3
30
95
0
169
18
7
50
24
1.72
10777--10830
18
3.3
18
66
28
57
20
7
50
22
1.73
11526--11605
42
2.0
40
87
5
115
18
30
28
22
1.98
11587--11650
29
2.2
29
91
2
103
21
20
39
18
1.93
11526--11621
41
2.3
42
83
3
124
19
26
32
21
1.97
15420--15463
22
2.0
22
90
0
70
54
0
0
45
0.99
15487--15523
16
2.3
17
86
13
60
62
0
0
37
0.96
15417--15595
72
2.4
75
79
11
172
50
2
0
46
1.17
15556--15607
15
3.2
15
73
19
50
55
1
0
42
1.10
15550--15604
17
3.2
17
71
19
51
54
1
0
43
1.10
18694--18750
28
2.0
28
83
6
71
57
1
0
40
1.09
18918--18956
14
2.8
13
88
7
51
46
7
12
33
1.71
19513--19572
22
2.8
22
85
5
70
50
0
0
50
1.00
26291--26328
19
2.0
19
100
0
76
47
0
15
36
1.46
28359--28528
93
1.8
91
92
5
288
28
29
20
21
1.98
28352--28525
44
3.8
44
79
14
194
29
29
20
20
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28352--28538
46
4.0
47
74
15
176
29
29
19
21
1.97
35917--36087
93
1.8
92
94
1
306
28
29
21
21
1.98
35910--36084
46
3.8
46
79
13
207
29
29
20
20
1.98
42406--42530
28
4.4
28
74
19
98
28
13
27
30
1.94
44801--44888
39
2.2
40
81
4
106
23
22
23
29
1.99

Tables:   1

The End!