Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1083
Parameters: 2 7 7 80 10 50 1000
Length:  50433

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7329--7405
9
7.9
9
72
16
64
35
9
20
35
1.85
7338--7409
11
7.1
11
70
17
66
36
12
19
31
1.89
7327--7409
20
4.2
20
96
0
157
36
12
19
32
1.88
7463--7604
23
6.0
24
86
8
202
29
20
21
28
1.98
7463--7583
47
2.6
48
93
2
210
30
19
19
29
1.97
7795--7858
31
2.1
31
90
0
101
35
15
23
25
1.94
14904--14980
9
7.9
9
72
16
64
35
9
20
35
1.85
14913--14984
11
7.1
11
70
17
66
36
12
19
31
1.89
14902--14984
20
4.2
20
96
0
157
36
12
19
32
1.88
15038--15133
23
4.0
24
81
14
117
31
20
19
28
1.97
15038--15133
25
4.0
23
80
11
95
31
20
19
28
1.97
22463--22760
48
6.2
48
75
6
280
28
18
27
25
1.98
22463--22737
144
1.9
144
84
3
365
28
17
28
25
1.98
25140--25227
42
2.1
42
97
0
167
36
10
12
40
1.77
31723--31905
66
2.8
64
77
10
194
30
17
30
22
1.97
43966--44368
202
2.0
200
94
2
702
26
15
28
30
1.96
46703--46750
25
1.9
25
86
0
69
33
25
16
25
1.96
46789--46865
9
7.9
9
72
16
64
35
9
20
35
1.85
46798--46869
11
7.1
11
70
17
66
36
12
19
31
1.89
46787--46869
20
4.2
20
96
0
157
36
12
19
32
1.88
46923--47042
45
2.6
48
93
6
203
30
20
20
29
1.97
46923--47063
23
6.0
24
85
13
195
29
20
21
28
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47260--47323
31
2.1
31
90
0
101
35
15
23
25
1.94

Tables:   1

The End!