Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3399
Parameters: 2 7 7 80 10 50 1000
Length:  49255

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2184--2335
27
5.6
27
92
3
232
30
28
14
26
1.95
2184--2335
55
2.8
55
93
0
250
30
28
14
26
1.95
10149--10300
27
5.6
27
93
3
241
30
28
13
26
1.94
10149--10300
55
2.8
55
94
0
259
30
28
13
26
1.94
16051--16113
16
3.9
16
85
0
72
39
4
25
30
1.76
16042--16112
32
2.2
32
77
5
81
40
7
23
28
1.81
16099--16187
43
2.0
45
86
6
128
32
6
25
34
1.82
16881--16947
33
2.0
33
94
0
116
38
22
13
25
1.90
20029--20184
72
2.2
73
88
1
224
51
4
30
14
1.62
23584--23704
54
2.2
53
80
12
131
31
36
18
14
1.90
24801--24836
18
2.0
18
88
0
54
47
30
0
22
1.52
25915--25941
14
1.9
14
100
0
54
44
11
0
44
1.39
31584--31806
40
5.6
39
83
5
232
24
20
28
26
1.99
31659--31841
79
2.3
80
81
1
217
25
20
28
25
1.99
39491--39707
39
5.5
39
80
6
172
25
20
28
25
1.99
39452--39674
79
2.8
79
80
5
227
24
20
28
26
1.99
39452--39672
40
5.6
38
80
8
185
24
20
28
26
1.99
39527--39707
78
2.3
79
80
4
204
25
20
28
25
1.99

Tables:   1

The End!