Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1804
Parameters: 2 7 7 80 10 50 1000
Length:  46512

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7689--7861
46
3.7
46
74
15
176
23
21
26
29
1.99
7686--7856
93
1.8
93
91
0
279
22
21
26
28
1.99
10181--10338
43
3.7
42
78
6
133
25
20
25
27
1.99
10182--10338
85
1.8
85
83
5
210
26
20
26
27
1.99
14474--14729
40
6.4
39
91
4
340
26
27
22
24
2.00
25975--26310
47
7.1
47
88
3
451
31
11
29
27
1.92
25975--26310
145
2.4
141
90
3
512
31
11
29
27
1.92
26120--26194
23
3.2
23
62
23
57
29
10
32
28
1.90
26121--26198
25
3.2
25
63
23
67
28
10
32
29
1.90
26284--26419
46
3.0
46
86
0
191
34
8
30
26
1.87
28808--28983
46
3.8
49
78
15
189
28
29
20
21
1.98
28808--28980
47
3.8
44
79
13
192
29
29
20
20
1.98
28815--28983
93
1.8
90
92
3
284
28
29
20
21
1.98
28808--28991
44
4.1
44
75
15
169
29
29
19
21
1.97
38481--38599
38
3.0
40
84
13
147
25
24
26
24
2.00
38681--38793
37
3.0
37
83
10
124
22
20
28
29
1.98
38681--38793
38
3.0
37
81
12
115
22
20
28
29
1.98
41938--42079
38
3.8
39
72
15
104
29
27
21
21
1.98
42098--42522
40
10.9
39
78
13
414
26
27
20
26
1.99
42157--42519
193
1.9
194
81
10
447
26
27
20
25
1.99
42098--42522
79
5.5
78
80
12
473
26
27
20
26
1.99

Tables:   1

The End!