Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2942
Parameters: 2 7 7 80 10 50 1000
Length:  45771

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2382--2411
7
4.3
7
100
0
60
60
13
0
26
1.34
2854--2904
25
2.1
24
86
13
70
47
0
9
43
1.36
7199--7566
43
8.6
43
86
0
459
30
28
16
24
1.97
7839--7876
18
2.2
18
85
4
51
71
2
0
26
1.00
9331--9742
48
8.7
47
72
14
218
27
17
29
24
1.98
13522--13694
46
3.7
46
77
14
185
20
19
30
28
1.97
13516--13687
93
1.8
93
91
2
283
20
20
30
28
1.98
21033--21328
114
2.7
108
81
5
281
27
19
20
32
1.97
21274--21351
40
2.0
40
86
0
111
30
20
20
28
1.98
31689--31754
19
3.2
21
87
6
64
36
19
9
34
1.84
31706--31803
19
5.2
19
92
7
164
35
16
10
37
1.82
31706--31803
36
2.6
37
90
9
153
35
16
10
37
1.82
33210--33264
26
2.1
26
100
0
110
38
23
7
30
1.82
33993--34031
19
2.2
19
86
9
55
35
12
5
46
1.65
34074--34150
24
3.2
24
70
12
68
35
18
25
20
1.95
34210--34349
25
5.6
26
70
14
64
38
17
23
20
1.93
34210--34349
50
2.8
49
75
10
131
38
17
23
20
1.93
35391--35420
15
2.0
15
93
0
51
50
0
10
40
1.36
35387--35449
27
2.3
26
76
10
63
38
0
11
50
1.38
35445--35476
10
3.3
10
95
4
57
31
6
0
62
1.20
36737--36844
44
2.4
44
84
3
135
29
23
12
34
1.92
41999--42104
26
4.2
26
86
3
153
33
23
8
34
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42002--42102
51
2.0
51
88
3
150
32
22
8
35
1.85

Tables:   1

The End!