Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1267
Parameters: 2 7 7 80 10 50 1000
Length:  44595

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
322--395
29
2.6
29
89
4
105
25
16
32
25
1.96
8381--8454
29
2.6
29
89
4
105
25
16
32
25
1.96
14863--15095
47
5.0
47
86
0
313
32
10
29
27
1.90
14881--15095
94
2.3
94
95
0
385
31
11
29
27
1.92
14985--15059
23
3.1
25
63
24
61
29
13
33
24
1.93
15257--15401
72
2.0
72
93
0
245
22
19
32
26
1.97
15258--15401
37
3.9
37
92
3
229
22
19
32
25
1.97
16660--17160
40
12.5
40
87
0
705
24
20
28
26
1.99
21267--21687
47
9.0
47
87
0
581
31
10
29
27
1.91
21388--21463
23
3.2
25
62
24
63
28
13
34
23
1.92
21577--21651
25
3.1
25
64
30
63
29
10
33
26
1.90
21267--21687
141
3.0
141
88
0
644
31
10
29
27
1.91
21850--22001
37
4.1
37
89
0
223
22
20
32
25
1.98
23545--23583
6
6.3
6
82
5
51
2
28
0
69
1.02
34253--34515
40
6.6
40
87
3
316
24
20
28
26
1.99
34292--34550
80
3.3
80
84
3
238
25
20
28
25
1.99
41722--41982
41
6.6
40
82
9
252
24
19
28
27
1.99
41722--41982
80
3.3
79
80
10
259
24
19
28
27
1.99

Tables:   1

The End!