Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1587
Parameters: 2 7 7 80 10 50 1000
Length:  44005

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
355--398
21
2.0
22
95
4
81
22
27
27
22
1.99
7096--7205
39
2.8
39
84
8
150
27
28
18
26
1.98
7049--7252
40
5.1
40
80
9
222
25
27
21
25
1.99
9292--9408
44
2.7
43
84
6
132
33
26
17
23
1.96
9258--9408
42
3.5
43
74
14
141
32
25
17
24
1.97
13983--14084
24
4.2
24
88
0
132
36
4
39
19
1.73
15339--15412
26
2.8
27
82
8
73
35
21
12
31
1.90
15509--15619
27
4.2
26
75
12
82
21
23
18
36
1.95
15513--15618
54
2.0
53
83
1
131
22
23
16
36
1.94
21886--21986
24
4.2
24
89
0
148
34
4
39
20
1.74
23418--23528
27
4.2
26
84
7
134
18
23
21
36
1.95
27105--27324
27
8.1
27
88
1
305
33
20
21
25
1.97
27467--27519
27
2.0
27
88
0
79
22
24
18
33
1.97
27683--27745
28
2.3
28
83
8
76
19
25
28
26
1.98
27709--27774
33
2.0
33
85
5
89
24
19
28
27
1.99
35733--35770
19
2.0
20
85
15
53
39
0
21
39
1.53
42862--42899
18
2.1
19
85
14
53
36
0
21
42
1.53

Tables:   1

The End!