Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2533
Parameters: 2 7 7 80 10 50 1000
Length:  42771

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3482--3551
27
2.6
26
95
2
95
31
28
12
27
1.93
3482--3579
28
3.5
28
90
2
135
31
28
13
26
1.94
5986--6022
15
2.4
16
86
8
51
48
18
0
32
1.49
11752--12059
93
3.3
93
89
0
474
22
18
28
30
1.97
11752--12013
47
5.6
47
71
15
220
22
17
28
31
1.97
11809--12113
46
6.6
46
76
13
252
21
18
28
31
1.97
14125--14177
26
2.0
26
85
3
70
26
20
24
28
1.99
16130--16285
82
1.9
81
85
3
215
26
16
28
28
1.97
16129--16282
55
2.9
52
82
7
175
27
16
27
27
1.97
16130--16285
27
5.7
27
81
6
163
26
16
28
28
1.97
16122--16306
27
6.8
27
75
9
101
26
16
28
29
1.97
16122--16306
82
2.3
81
78
2
210
26
16
28
29
1.97
17735--17822
32
2.8
32
87
0
122
25
20
28
26
1.99
17725--17792
32
2.4
26
70
25
64
27
17
25
29
1.97
18559--18647
23
3.9
23
77
11
85
37
19
22
21
1.95
25244--25285
14
2.9
15
79
13
52
40
2
19
38
1.64
35994--36122
40
3.3
40
91
6
187
26
27
21
24
1.99

Tables:   1

The End!