Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold720
Parameters: 2 7 7 80 10 50 1000
Length:  35359

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1935--2322
46
8.4
47
89
6
514
34
9
27
27
1.89
1935--2322
141
2.8
141
85
8
530
34
9
27
27
1.89
1935--2313
45
8.2
46
89
6
472
34
10
27
27
1.89
1935--2339
47
8.8
46
86
8
429
35
9
27
27
1.88
3879--3919
20
2.0
21
86
9
59
31
7
19
41
1.79
3925--4144
39
5.7
40
84
10
246
25
22
27
25
2.00
11793--11976
40
4.7
40
84
9
218
24
22
27
25
2.00
11793--11976
79
2.3
80
84
8
234
24
22
27
25
2.00
11794--12009
79
2.7
79
81
8
201
25
21
27
24
1.99
19708--19933
40
5.7
39
90
5
289
27
21
26
24
1.99
19669--19933
80
3.3
79
87
7
351
26
21
26
24
2.00
19670--19933
40
6.6
39
87
7
256
26
21
26
24
2.00
19669--19966
80
3.8
77
84
7
307
27
21
26
24
1.99
21308--21407
29
3.4
29
65
10
78
23
20
26
31
1.98
21337--21491
29
5.4
29
70
11
113
21
18
31
28
1.97
21395--21491
28
3.4
28
73
7
88
20
18
34
26
1.96
21305--21473
58
2.9
58
93
0
286
22
18
29
28
1.98
21741--21787
21
2.2
21
96
0
85
42
2
21
34
1.65
21748--21793
21
2.2
21
88
0
65
43
4
17
34
1.69
25072--25200
38
3.4
38
83
1
168
18
20
26
34
1.95
26737--26872
43
3.2
43
94
0
227
11
22
33
31
1.90
27029--27128
29
3.4
29
68
10
87
23
19
26
32
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27050--27192
29
5.0
28
71
10
119
23
17
29
30
1.97
27116--27212
28
3.4
28
73
9
81
21
16
32
28
1.95
27026--27194
58
2.9
57
88
2
248
23
17
28
30
1.97
27462--27508
21
2.2
21
96
0
85
42
2
21
34
1.65
27469--27514
21
2.2
21
88
0
65
43
4
17
34
1.69
34442--34515
27
2.6
28
78
20
82
28
12
29
29
1.93

Tables:   1

The End!