Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2057
Parameters: 2 7 7 80 10 50 1000
Length:  76733

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6704--6928
119
1.9
120
84
6
305
25
27
22
24
2.00
6704--6928
40
5.7
40
86
6
296
25
27
22
24
2.00
25110--25290
40
4.6
39
81
11
185
24
22
28
25
1.99
31604--31787
96
1.9
97
80
10
216
42
4
7
45
1.52
49284--49430
41
3.6
41
80
5
156
36
22
19
21
1.96
49300--49430
41
3.2
41
82
5
176
37
23
19
19
1.94
49310--49470
82
2.0
82
81
4
191
36
21
19
22
1.95
49300--49479
82
2.2
82
77
7
186
38
22
18
20
1.93
49754--49818
7
9.1
7
73
9
60
43
36
3
16
1.64
49932--49993
7
8.7
7
76
3
52
24
3
25
46
1.67
49951--49990
15
2.7
15
88
3
64
17
5
32
45
1.70
49932--49992
14
4.3
14
79
4
59
22
3
26
47
1.67
50306--50359
21
2.6
21
81
0
81
11
1
33
53
1.47
50983--51066
40
2.1
40
90
0
132
32
15
21
30
1.94
51341--51383
22
2.0
22
81
9
52
37
37
4
20
1.74
55130--55229
43
2.3
43
87
0
137
46
17
1
36
1.55
55217--55250
9
3.8
9
84
0
50
47
20
0
32
1.51
58734--58916
79
2.3
79
80
7
192
26
27
21
24
2.00
58760--58863
39
2.6
40
89
1
156
26
27
20
25
1.99
58732--58916
40
4.7
40
80
7
207
26
27
21
24
1.99
60051--60170
56
2.1
56
98
0
231
22
23
9
45
1.81
63385--63413
14
2.1
14
93
6
51
34
0
10
55
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65782--65969
41
4.7
41
84
5
258
20
22
28
28
1.98
65782--65969
78
2.3
81
87
3
256
20
22
28
28
1.98
74063--74292
40
5.8
41
84
8
314
21
21
28
28
1.99
74075--74292
79
2.7
81
88
6
286
21
21
28
28
1.99

Tables:   1

The End!