Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold278
Parameters: 2 7 7 80 10 50 1000
Length:  111759

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
754--976
48
4.4
48
79
12
211
26
25
28
20
1.99
7902--7959
30
1.9
30
89
0
89
41
3
24
31
1.71
8170--8201
13
2.5
13
94
0
55
31
0
12
56
1.37
8296--8543
50
4.8
50
85
5
302
26
23
29
20
1.99
8296--8544
100
2.4
102
87
7
353
26
23
29
20
1.99
13779--13991
108
1.9
109
85
6
295
50
9
3
36
1.52
24745--24793
25
1.9
26
87
4
73
28
0
2
69
1.00
27482--27530
20
2.5
20
83
3
64
26
12
6
55
1.60
34718--34760
22
2.0
22
86
9
61
27
6
4
60
1.43
39016--39046
12
2.5
13
89
10
55
45
25
0
29
1.54
39579--39605
5
5.4
5
100
0
54
18
0
0
81
0.69
46098--46164
26
2.5
28
81
13
97
50
0
1
47
1.10
47687--47729
22
1.9
23
85
4
61
48
4
0
46
1.22
49050--49098
25
2.0
24
88
11
73
22
28
4
44
1.71
50589--50638
3
16.7
3
95
0
73
60
0
6
34
1.21
51412--51444
11
3.1
11
86
4
50
81
3
6
9
0.95
52377--52538
87
1.9
87
82
2
209
24
24
21
29
1.99
52389--52757
44
8.6
43
73
9
236
26
23
20
29
1.99
52338--52804
213
2.2
214
87
3
661
26
22
20
29
1.99
63928--63977
26
2.0
25
88
7
75
46
4
28
22
1.70
66841--66893
19
2.8
20
77
5
56
47
1
0
50
1.12
68971--69004
13
2.7
13
90
4
52
41
0
0
58
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73993--74024
13
2.5
13
94
0
55
31
3
25
40
1.71
75800--75824
9
2.8
9
100
0
50
24
0
0
76
0.80
82513--82560
24
2.0
23
84
11
62
47
2
0
50
1.12
83733--83791
29
2.0
30
81
12
70
42
1
1
54
1.20
86977--87031
3
17.7
3
87
7
65
60
0
5
34
1.20
87479--87503
9
2.8
9
100
0
50
92
0
0
8
0.40
88840--89159
44
7.7
43
72
13
181
27
23
20
29
1.98
88830--89204
206
1.8
210
86
6
559
26
22
20
30
1.98
107879--107907
1
29.0
1
100
0
58
100
0
0
0
0.00
109106--109313
46
4.7
46
74
11
175
30
21
20
26
1.98
109103--109304
87
2.3
88
91
2
316
30
21
20
27
1.98
109149--109391
44
5.6
44
73
8
183
30
21
21
26
1.98
109242--109403
87
1.9
87
84
2
218
29
20
24
25
1.99

Tables:   1

The End!