Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold834
Parameters: 2 7 7 80 10 50 1000
Length:  65653

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4027--4209
41
4.7
41
86
7
247
25
28
20
25
1.99
4027--4288
39
6.6
40
82
6
266
25
28
20
24
1.99
4027--4223
80
2.5
78
83
8
265
26
28
20
24
1.99
4030--4288
81
3.3
81
82
6
228
25
28
21
24
1.99
10768--11030
40
6.6
40
87
3
316
26
28
20
24
1.99
13038--13141
43
2.4
43
83
3
120
34
27
15
22
1.94
26306--26381
34
2.2
34
92
0
125
28
23
21
26
1.99
29329--29379
22
2.3
21
89
0
66
17
29
37
15
1.91
31952--32035
44
1.9
44
85
0
114
29
15
23
30
1.95
31972--32082
45
2.5
46
85
4
138
27
11
21
39
1.88
32969--33148
51
3.4
52
88
9
281
51
10
21
16
1.73
33068--33097
13
2.3
13
94
0
51
80
0
20
0
0.72
33017--33148
57
2.3
56
92
6
212
53
9
21
15
1.69
34391--34612
40
5.6
40
87
3
286
22
22
28
26
1.99
34391--34612
120
1.9
120
88
3
340
22
22
28
26
1.99
37029--37096
25
2.8
25
77
6
77
25
19
23
32
1.97
41238--41739
47
10.6
47
94
0
806
33
8
29
29
1.87
41331--41648
49
6.8
39
97
1
114
33
8
28
29
1.86
41348--41423
22
3.3
22
66
16
64
32
10
30
26
1.90
44494--44821
164
2.0
164
88
4
484
34
25
1
38
1.65
44706--44745
20
2.0
20
85
9
55
25
30
0
45
1.54
45150--45187
19
2.0
19
94
0
67
28
10
28
31
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50555--50777
40
5.6
40
86
5
290
28
27
21
22
1.99
50554--50777
80
2.8
80
88
1
324
28
28
21
22
1.99
52073--52102
13
2.3
13
94
0
51
0
20
0
80
0.72
52022--52143
57
2.2
56
95
1
217
16
21
9
52
1.72
61168--61292
53
2.4
53
86
10
168
54
7
21
16
1.66

Tables:   1

The End!