Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1857
Parameters: 2 7 7 80 10 50 1000
Length:  61334

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7849--7977
46
2.8
46
95
0
222
30
28
20
20
1.98
7854--7996
46
3.1
45
87
4
137
29
28
20
20
1.98
19998--20140
43
3.3
41
71
15
103
31
27
19
21
1.97
20017--20162
43
3.4
42
76
11
136
34
24
17
22
1.96
31467--31615
51
3.1
50
74
15
152
33
28
14
22
1.94
31527--31611
43
2.0
43
90
0
134
30
32
16
20
1.94
48797--48860
6
10.8
6
85
9
87
17
3
0
79
0.85
48801--48880
17
4.6
17
83
7
90
18
3
0
77
0.92
48797--48860
29
2.2
29
88
8
94
17
3
0
79
0.85
48807--48880
29
2.5
29
84
8
87
18
4
0
77
0.93
51557--51654
27
3.5
28
87
5
119
25
12
29
32
1.92
51585--51668
27
3.0
27
85
5
87
29
10
26
33
1.90
59776--59873
27
3.5
28
88
5
128
25
13
28
32
1.93
59804--59887
27
3.0
27
87
5
96
29
11
25
33
1.91

Tables:   1

The End!