Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2275
Parameters: 2 7 7 80 10 50 1000
Length:  56279

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4622--4732
41
2.8
40
84
10
138
25
23
26
25
2.00
4620--4761
38
3.6
39
82
9
162
26
23
26
23
2.00
12113--12160
21
2.4
21
86
6
64
37
14
12
35
1.84
13909--13960
22
2.4
22
96
3
97
34
9
15
40
1.80
21357--21524
40
4.2
40
83
4
106
25
27
23
23
2.00
21380--21524
40
3.6
40
85
4
193
23
26
24
25
2.00
25119--25201
28
2.7
33
71
21
88
28
18
25
27
1.98
26295--26401
27
4.0
27
83
0
124
37
19
19
23
1.94
26295--26397
54
1.9
53
86
2
143
37
18
20
23
1.94
26775--26814
16
2.5
16
87
0
62
27
30
35
7
1.84
27159--27217
27
2.2
26
84
3
73
22
23
18
35
1.96
34051--34178
47
2.7
46
84
2
157
18
24
13
43
1.86
34631--34670
20
2.0
21
90
5
64
35
22
22
20
1.96
40451--40475
11
2.3
11
100
0
50
24
0
8
68
1.16
40708--40732
7
3.6
7
100
0
50
56
0
16
28
1.41
42320--42392
24
3.1
24
71
18
64
38
12
15
34
1.84
46335--46403
34
2.0
34
97
0
129
36
15
10
37
1.82
53183--53208
12
2.2
12
100
0
52
50
7
0
42
1.31
53658--53808
28
5.4
28
91
1
214
25
12
28
33
1.92

Tables:   1

The End!