Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold272
Parameters: 2 7 7 80 10 50 1000
Length:  52784

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7007--7227
40
5.6
40
86
4
288
26
28
21
22
1.99
10681--10754
25
3.0
25
98
2
141
36
4
39
20
1.71
12164--12274
27
4.2
26
84
3
132
16
24
21
37
1.93
24838--25285
69
6.5
68
85
2
527
22
24
22
30
1.99
24835--25285
207
2.2
207
85
2
591
22
24
23
30
1.99
31329--31373
22
2.0
22
100
0
90
17
8
13
60
1.58
42741--42788
21
2.2
22
85
3
62
47
0
0
52
1.00
42885--42922
14
2.5
15
83
12
51
65
0
0
34
0.93
46234--46297
31
2.1
31
90
0
101
25
23
15
35
1.94
46505--46635
25
5.4
23
88
7
163
28
22
19
29
1.98
46529--46634
25
4.4
25
95
3
182
27
23
19
29
1.98
46681--46731
20
2.5
20
90
0
75
33
19
11
35
1.88
46768--46815
25
1.9
25
95
0
87
25
12
25
37
1.91

Tables:   1

The End!