Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2603
Parameters: 2 7 7 80 10 50 1000
Length:  52205

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9562--9768
73
2.8
73
80
6
231
29
17
25
28
1.97
9855--10111
89
2.9
89
88
5
351
25
19
20
34
1.96
10056--10313
72
3.5
71
84
5
322
27
17
24
29
1.98
10036--10313
74
3.8
72
83
4
342
27
17
23
30
1.97
10310--10339
14
2.1
14
100
0
60
36
33
23
6
1.81
12477--12584
24
4.4
24
73
23
73
30
8
5
55
1.52
12568--12650
34
2.4
33
78
13
87
34
6
7
51
1.54
21894--23193
205
6.4
205
93
1
2073
31
17
21
29
1.96
23311--23569
44
5.9
43
76
9
177
31
16
25
27
1.97
24018--24098
28
2.7
30
84
9
112
27
4
16
51
1.64
25787--25837
26
2.0
26
96
0
93
29
35
23
11
1.90
25653--25914
102
2.6
102
93
4
449
30
30
20
19
1.97
25812--25990
77
2.3
76
97
0
331
32
30
18
18
1.95
26314--26377
30
2.2
29
81
10
76
29
28
6
35
1.82
26321--26377
30
1.9
30
85
3
80
29
24
7
38
1.82
33436--33486
26
2.0
26
96
0
93
29
35
23
11
1.90
33200--33562
101
3.6
103
94
4
605
30
30
20
18
1.97
33885--33948
30
2.2
29
81
10
76
29
28
6
35
1.82
33892--33948
30
1.9
30
85
3
80
29
24
7
38
1.82
34991--35023
3
11.0
3
100
0
66
33
0
0
66
0.92
35118--35160
16
2.8
15
86
6
59
30
6
0
62
1.21
35262--35293
16
2.0
16
93
0
55
21
21
6
50
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35293--35412
3
39.7
3
70
17
61
34
8
0
56
1.35
35421--35458
12
3.1
13
81
11
53
31
5
0
63
1.17
36753--36782
10
3.0
10
95
0
51
0
43
0
56
0.99
39342--39387
22
2.1
22
84
4
58
21
6
10
60
1.52
50253--51553
205
6.4
205
92
1
2066
31
17
21
29
1.96
50253--51553
411
3.2
408
91
2
2032
31
17
21
29
1.96
51670--51934
44
6.1
44
75
12
192
31
16
25
25
1.97

Tables:   1

The End!