Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold449
Parameters: 2 7 7 80 10 50 1000
Length:  51717

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30--168
52
2.6
54
87
8
196
0
42
27
29
1.61
547--653
49
2.2
48
88
4
162
0
41
29
28
1.63
3095--3193
41
2.2
45
84
10
134
2
34
34
29
1.69
3114--3261
72
2.1
68
87
9
210
2
33
33
31
1.70
7160--8034
47
18.4
47
88
6
1124
32
9
28
29
1.88
7160--8034
142
6.1
141
87
6
1142
32
9
28
29
1.88
8151--8228
36
2.1
37
88
2
113
24
19
30
25
1.98
10665--10724
23
2.6
23
82
14
79
36
11
5
46
1.62
10941--11004
24
2.7
24
85
2
76
54
10
1
32
1.45
13817--13894
41
1.9
41
100
0
156
43
23
7
25
1.80
16241--16384
27
5.3
27
88
3
191
30
25
6
37
1.81
16416--16538
27
4.6
27
83
2
131
39
18
9
31
1.83
16388--16538
54
2.8
54
83
2
169
40
17
10
31
1.83
16442--16567
27
4.7
26
81
8
110
41
19
8
30
1.82
16416--16644
54
4.2
55
78
8
184
40
17
9
32
1.82
16416--16649
110
2.1
108
80
4
247
39
19
9
31
1.83
16522--16629
27
3.9
27
72
15
87
42
18
7
31
1.78
16683--16746
27
2.4
27
78
5
67
39
17
20
23
1.92
26555--26829
46
5.8
50
72
15
149
23
29
18
29
1.97
26595--26865
46
5.7
46
75
11
176
22
29
19
28
1.98
26604--26871
93
2.8
95
76
12
257
22
29
19
29
1.98
26595--26865
139
1.9
143
82
6
347
22
29
19
28
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36701--36911
40
5.3
41
83
5
265
24
20
27
27
1.99
36701--36892
80
2.4
79
93
0
330
23
20
28
26
1.99
46806--47097
50
5.7
50
72
20
178
34
7
28
28
1.85

Tables:   1

The End!