Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3568
Parameters: 2 7 7 80 10 50 1000
Length:  50515

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1479--1662
39
4.7
40
82
8
189
25
21
27
25
1.99
1480--1660
78
2.3
81
81
5
210
25
21
27
24
1.99
1480--1695
78
2.7
78
78
7
186
26
21
27
24
1.99
8938--9120
40
4.6
39
81
6
179
25
21
27
25
2.00
8939--9120
80
2.3
81
81
4
210
25
21
27
24
2.00
13115--13266
68
2.2
68
80
4
189
36
17
18
27
1.93
13940--14004
33
1.9
34
87
3
96
26
23
20
30
1.98
14805--14975
85
2.0
85
100
0
342
39
25
11
23
1.89
16229--16340
27
4.2
27
82
5
129
36
21
23
18
1.95
16229--16340
54
2.1
53
88
1
161
36
21
23
18
1.95
17775--17851
24
3.2
24
94
0
127
20
42
3
32
1.70
24123--24231
27
4.1
27
83
5
132
35
20
24
19
1.95
24123--24231
54
2.0
53
89
1
164
35
20
24
19
1.95
25654--25730
24
3.2
24
92
0
118
19
42
5
32
1.73
28578--28759
28
6.5
28
92
1
285
27
12
26
33
1.92
36727--36907
28
6.5
28
92
1
276
28
12
25
33
1.92

Tables:   1

The End!