Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold789
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 45932
ACGTcount: A:0.32, C:0.17, G:0.20, T:0.32
Found at i:2381 original size:40 final size:40
Alignment explanation
Indices: 2213--2381 Score: 175
Period size: 40 Copynumber: 4.2 Consensus size: 40
2203 CCTTCAGAAT
**
2213 TTAA-CCGGATATAGCT-ACTCGTTCAAATGCCTTCGGGAC
1 TTAACCCGGATATAG-TAACTCGCACAAATGCCTTCGGGAC
* * *
2252 ATAGCCCGGTTATAGTAACTCGCACAAATGCCTTCGGGAC
1 TTAACCCGGATATAGTAACTCGCACAAATGCCTTCGGGAC
* *
2292 TTAACCTGGATTTAGTAACTCGCACAAATGCCTTC-GGATC
1 TTAACCCGGATATAGTAACTCGCACAAATGCCTTCGGGA-C
** * * *
2332 TTAGTCCGGATATGGTCACTTAGCACAAA-GCCTTCGGGAC
1 TTAACCCGGATATAGTAAC-TCGCACAAATGCCTTCGGGAC
2372 TTAACCCGGA
1 TTAACCCGGA
2382 CATCATTCGA
Statistics
Matches: 106, Mismatches: 19, Indels: 9
0.79 0.14 0.07
Matches are distributed among these distances:
39 6 0.06
40 89 0.84
41 11 0.10
ACGTcount: A:0.27, C:0.26, G:0.21, T:0.26
Consensus pattern (40 bp):
TTAACCCGGATATAGTAACTCGCACAAATGCCTTCGGGAC
Found at i:18538 original size:13 final size:13
Alignment explanation
Indices: 18520--18545 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
18510 ATATTATAAT
18520 TATTTTATGTTAA
1 TATTTTATGTTAA
18533 TATTTTATGTTAA
1 TATTTTATGTTAA
18546 AAATAAAAAT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.00, G:0.08, T:0.62
Consensus pattern (13 bp):
TATTTTATGTTAA
Found at i:19970 original size:40 final size:40
Alignment explanation
Indices: 19922--20127 Score: 335
Period size: 40 Copynumber: 5.2 Consensus size: 40
19912 GGACTAAGAT
19922 CCGAAGGCATTTGTGCTAGTGACTATATCCGGGCTAAGTC
1 CCGAAGGCATTTGTGCTAGTGACTATATCCGGGCTAAGTC
* *
19962 TCGAAGGCATTTGTGCTAGTTACTATATCCGGGCTAAGTC
1 CCGAAGGCATTTGTGCTAGTGACTATATCCGGGCTAAGTC
20002 CCGAAGGCATTTGTGCTAGTGACTATATCCGGGCTAAGTC
1 CCGAAGGCATTTGTGCTAGTGACTATATCCGGGCTAAGTC
* *
20042 CCGAAGGCATTTGTGCTAGTGATTATATACGGGCTAAGTC
1 CCGAAGGCATTTGTGCTAGTGACTATATCCGGGCTAAGTC
* *
20082 CCGAAGGCATTTGTGCGAGTTG-CTATATCC-GGCTAAATC
1 CCGAAGGCATTTGTGCTAG-TGACTATATCCGGGCTAAGTC
20121 CCGAAGG
1 CCGAAGG
20128 TACTTGGGTT
Statistics
Matches: 155, Mismatches: 10, Indels: 3
0.92 0.06 0.02
Matches are distributed among these distances:
39 15 0.10
40 138 0.89
41 2 0.01
ACGTcount: A:0.23, C:0.21, G:0.27, T:0.28
Consensus pattern (40 bp):
CCGAAGGCATTTGTGCTAGTGACTATATCCGGGCTAAGTC
Found at i:22677 original size:49 final size:51
Alignment explanation
Indices: 22557--22703 Score: 172
Period size: 49 Copynumber: 2.8 Consensus size: 51
22547 ATTAGGGTTT
* * *
22557 AAGGATACCATGTAAGACCATGCCAAGGCATGGCAATTGGTGAGGTTTCTAAGG
1 AAGGATACCATGTAAGACCATGACAAGACATGGCAA-TGGT-AAGTTTCTAA-G
* * *
22611 CAAGGAAACCATGTAAGACCATGTCAAGACATGGTAATGGTAAGTTTC-AA-
1 -AAGGATACCATGTAAGACCATGACAAGACATGGCAATGGTAAGTTTCTAAG
* *
22661 AAGGATACCACGTAAGACCATGACAAGTCATGGCAATGGTAAG
1 AAGGATACCATGTAAGACCATGACAAGACATGGCAATGGTAAG
22704 GTACCCGCGT
Statistics
Matches: 82, Mismatches: 10, Indels: 6
0.84 0.10 0.06
Matches are distributed among these distances:
49 38 0.46
52 2 0.02
53 6 0.07
54 4 0.05
55 32 0.39
ACGTcount: A:0.37, C:0.17, G:0.26, T:0.20
Consensus pattern (51 bp):
AAGGATACCATGTAAGACCATGACAAGACATGGCAATGGTAAGTTTCTAAG
Found at i:31390 original size:40 final size:40
Alignment explanation
Indices: 31293--31516 Score: 278
Period size: 40 Copynumber: 5.7 Consensus size: 40
31283 TTGAATGATG
* * * *
31293 TCCGGGCTAAGTCCCGAAGGC-TTTGTGCTAAGTGACCATA
1 TCCGGGCTAAGTCCCGAAGGCATTTGTGC-GAGTTACTAAA
*
31333 TCCGGACTAAGAT-CCGAAGGCATTTGTGCGAGTTACTAAA
1 TCCGGGCTAAG-TCCCGAAGGCATTTGTGCGAGTTACTAAA
* * * *
31373 TTCGGGTTAAGTCCCGAAGGCATTTGTGCGAGATACTAAT
1 TCCGGGCTAAGTCCCGAAGGCATTTGTGCGAGTTACTAAA
31413 TCCGGGCTAAG-CCCGAAGGCATTTGTGCGAGTTACTAAA
1 TCCGGGCTAAGTCCCGAAGGCATTTGTGCGAGTTACTAAA
* *
31452 TCCGGGTTAAGTCCCGAAGGCAATTGTGCGAGTTACTATAA
1 TCCGGGCTAAGTCCCGAAGGCATTTGTGCGAGTTACTA-AA
*
31493 -CCGGGCTATGTCCCGAA-GCATTTG
1 TCCGGGCTAAGTCCCGAAGGCATTTG
31517 AACGAGTAGC
Statistics
Matches: 160, Mismatches: 19, Indels: 11
0.84 0.10 0.06
Matches are distributed among these distances:
39 43 0.27
40 107 0.67
41 10 0.06
ACGTcount: A:0.25, C:0.22, G:0.27, T:0.26
Consensus pattern (40 bp):
TCCGGGCTAAGTCCCGAAGGCATTTGTGCGAGTTACTAAA
Found at i:31506 original size:119 final size:119
Alignment explanation
Indices: 31293--31516 Score: 294
Period size: 119 Copynumber: 1.9 Consensus size: 119
31283 TTGAATGATG
* *
31293 TCCGGGCTAAGTCCCGAAGGCTTTGTGCTAAGTGACCATATCCGGACTAAGATCCGAAGGCATTT
1 TCCGGGCTAAGTCCCGAAGGCTTTGTGCTAAGTGACCAAATCCGGACTAAGATCCGAAGGCAATT
* *
31358 GTGCGAGTTACTAAATTCGGGTTAAGTCCCGAAGGCATTTGTGCGAGATACTAAT
66 GTGCGAGTTACTAAATCCGGGCTAAGTCCCGAA-GCATTTGTGCGAGATACTAAT
* * * **
31413 TCCGGGCTAAG-CCCGAAGGCATTTGTGC-GAGTTACTAAATCCGGGTTAAG-TCCCGAAGGCAA
1 TCCGGGCTAAGTCCCGAAGGC-TTTGTGCTAAGTGACCAAATCCGGACTAAGAT-CCGAAGGCAA
*
31475 TTGTGCGAGTTACTATAA-CCGGGCTATGTCCCGAAGCATTTG
64 TTGTGCGAGTTACTA-AATCCGGGCTAAGTCCCGAAGCATTTG
31517 AACGAGTAGC
Statistics
Matches: 91, Mismatches: 10, Indels: 8
0.83 0.09 0.07
Matches are distributed among these distances:
118 8 0.09
119 63 0.69
120 20 0.22
ACGTcount: A:0.25, C:0.22, G:0.27, T:0.26
Consensus pattern (119 bp):
TCCGGGCTAAGTCCCGAAGGCTTTGTGCTAAGTGACCAAATCCGGACTAAGATCCGAAGGCAATT
GTGCGAGTTACTAAATCCGGGCTAAGTCCCGAAGCATTTGTGCGAGATACTAAT
Found at i:31523 original size:79 final size:80
Alignment explanation
Indices: 31293--31516 Score: 296
Period size: 79 Copynumber: 2.8 Consensus size: 80
31283 TTGAATGATG
* * * * *
31293 TCCGGGCTAAGTCCCGAAGGC-TTTGTGCTAAGTGACCATATCCGGACTAAGAT-CCGAAGGCAT
1 TCCGGGTTAAGTCCCGAAGGCATTTGTGC-GAGTTACTATATCCGGGCTAAG-TCCCGAAGGCAT
31356 TTGTGCGAGTTACTAAA
64 TTGTGCGAGTTACTAAA
* *
31373 TTCGGGTTAAGTCCCGAAGGCATTTGTGCGAGATACTA-ATTCCGGGCTAAG-CCCGAAGGCATT
1 TCCGGGTTAAGTCCCGAAGGCATTTGTGCGAGTTACTATA-TCCGGGCTAAGTCCCGAAGGCATT
31436 TGTGCGAGTTACTAAA
65 TGTGCGAGTTACTAAA
* * *
31452 TCCGGGTTAAGTCCCGAAGGCAATTGTGCGAGTTACTATAACCGGGCTATGTCCCGAA-GCATTT
1 TCCGGGTTAAGTCCCGAAGGCATTTGTGCGAGTTACTATATCCGGGCTAAGTCCCGAAGGCATTT
31516 G
66 G
31517 AACGAGTAGC
Statistics
Matches: 127, Mismatches: 12, Indels: 11
0.85 0.08 0.07
Matches are distributed among these distances:
79 79 0.62
80 41 0.32
81 7 0.06
ACGTcount: A:0.25, C:0.22, G:0.27, T:0.26
Consensus pattern (80 bp):
TCCGGGTTAAGTCCCGAAGGCATTTGTGCGAGTTACTATATCCGGGCTAAGTCCCGAAGGCATTT
GTGCGAGTTACTAAA
Found at i:31534 original size:79 final size:79
Alignment explanation
Indices: 31346--31549 Score: 245
Period size: 79 Copynumber: 2.6 Consensus size: 79
31336 GGACTAAGAT
** * *
31346 CCGAAGGCATTTGTGCGAGTTACTAAATTCGGGTTAAGTCCCGAAGGCATTTGTGCGAGATACTA
1 CCGAAGGCATTTGAACGAGTTACTAAATCCGGGTTAAGTCCCGAAGGCAATTGTGCGAGATACTA
*
31411 ATTCCGGGCTAAGC
66 ATACCGGGCTAAGC
** *
31425 CCGAAGGCATTTGTGCGAGTTACTAAATCCGGGTTAAGTCCCGAAGGCAATTGTGCGAGTTACT-
1 CCGAAGGCATTTGAACGAGTTACTAAATCCGGGTTAAGTCCCGAAGGCAATTGTGCGAGATACTA
*
31489 ATAACCGGGCTATGTC
66 AT-ACCGGGCTAAG-C
* * *
31505 CCGAA-GCATTTGAACGAG-TAGCTATATCC-GGTTAAATTCCGAAGG
1 CCGAAGGCATTTGAACGAGTTA-CTAAATCCGGGTTAAGTCCCGAAGG
31550 TACGTGATTT
Statistics
Matches: 112, Mismatches: 10, Indels: 7
0.87 0.08 0.05
Matches are distributed among these distances:
78 18 0.16
79 88 0.79
80 6 0.05
ACGTcount: A:0.26, C:0.21, G:0.27, T:0.26
Consensus pattern (79 bp):
CCGAAGGCATTTGAACGAGTTACTAAATCCGGGTTAAGTCCCGAAGGCAATTGTGCGAGATACTA
ATACCGGGCTAAGC
Found at i:39445 original size:40 final size:40
Alignment explanation
Indices: 39261--39482 Score: 251
Period size: 39 Copynumber: 5.7 Consensus size: 40
39251 TTGAATGATG
* * * *
39261 TCCGGGCTAAGT-CCGAAGGC-TTTGTGCTAAGTGACCATA
1 TCCGGGCTAAGTCCCGAAGGCATTTGTGC-GAGTTACTAAA
*
39300 TCCGGACTAAGAT-CCGAAGGCATTTGTGCGAG-TACTAAA
1 TCCGGGCTAAG-TCCCGAAGGCATTTGTGCGAGTTACTAAA
* * *
39339 TCCGGGTTAAGTCCCGAAGGCATTTGTGCGAGATACTAAT
1 TCCGGGCTAAGTCCCGAAGGCATTTGTGCGAGTTACTAAA
* *
39379 TCCGGGCTAAG-ACCGAAGGCATTTGTGTGAGTTACTAAA
1 TCCGGGCTAAGTCCCGAAGGCATTTGTGCGAGTTACTAAA
* *
39418 TCCGGGTTAAGTCCCGAAGGCAATTGTGCGAGTTACTATAA
1 TCCGGGCTAAGTCCCGAAGGCATTTGTGCGAGTTACTA-AA
*
39459 -CCGGGCTATGTCCCGAA-GCATTTG
1 TCCGGGCTAAGTCCCGAAGGCATTTG
39483 AACGAGTAGC
Statistics
Matches: 157, Mismatches: 20, Indels: 12
0.83 0.11 0.06
Matches are distributed among these distances:
38 1 0.01
39 82 0.52
40 65 0.41
41 9 0.06
ACGTcount: A:0.26, C:0.21, G:0.27, T:0.26
Consensus pattern (40 bp):
TCCGGGCTAAGTCCCGAAGGCATTTGTGCGAGTTACTAAA
Found at i:39463 original size:79 final size:79
Alignment explanation
Indices: 39261--39515 Score: 281
Period size: 79 Copynumber: 3.3 Consensus size: 79
39251 TTGAATGATG
* * * * *
39261 TCCGGGCTAAGT-CCGAAGGC-TTTGTGCTAAGTGACCATATCCGGACTAAGATCCGAAGGCATT
1 TCCGGGTTAAGTCCCGAAGGCATTTGTGC-GAGTTACTATATCCGGGCTAAGATCCGAAGGCATT
39324 TGTGCGAGTACTAAA
65 TGTGCGAGTACTAAA
*
39339 TCCGGGTTAAGTCCCGAAGGCATTTGTGCGAGATACTA-ATTCCGGGCTAAGA-CCGAAGGCATT
1 TCCGGGTTAAGTCCCGAAGGCATTTGTGCGAGTTACTATA-TCCGGGCTAAGATCCGAAGGCATT
*
39402 TGTGTGAGTTACTAAA
65 TGTGCGAG-TACTAAA
* * *
39418 TCCGGGTTAAGTCCCGAAGGCAATTGTGCGAGTTACTATAACCGGGCTATG-TCCCGAA-GCATT
1 TCCGGGTTAAGTCCCGAAGGCATTTGTGCGAGTTACTATATCCGGGCTAAGAT-CCGAAGGCATT
** *
39481 TGAACGAGTAGCTATA
65 TGTGCGAGTA-CTAAA
* *
39497 TCC-GGTTAAATTCCGAAGG
1 TCCGGGTTAAGTCCCGAAGG
39516 TACGTGATTT
Statistics
Matches: 152, Mismatches: 17, Indels: 16
0.82 0.09 0.09
Matches are distributed among these distances:
78 46 0.30
79 93 0.61
80 13 0.09
ACGTcount: A:0.27, C:0.21, G:0.27, T:0.25
Consensus pattern (79 bp):
TCCGGGTTAAGTCCCGAAGGCATTTGTGCGAGTTACTATATCCGGGCTAAGATCCGAAGGCATTT
GTGCGAGTACTAAA
Found at i:39501 original size:118 final size:118
Alignment explanation
Indices: 39261--39488 Score: 284
Period size: 118 Copynumber: 1.9 Consensus size: 118
39251 TTGAATGATG
* * *
39261 TCCGGGCTAAGTCCGAAGGCTTTGTGCTAAGTGACCATATCCGGACTAAGATCCGAAGGCATTTG
1 TCCGGGCTAAGACCGAAGGCTTTGTGCTAAGTGACCAAATCCGGACTAAGATCCGAAGGCAATTG
* **
39326 TGCGAGTACTAAATCCGGGTTAAGTCCCGAAGGCATTTGTGCGAGATACTAAT
66 TGCGAGTACTAAATCCGGGCTAAGTCCCGAAGGCATTTGAACGAGATACTAAT
* * * **
39379 TCCGGGCTAAGACCGAAGGCATTTGTG-TGAGTTACTAAATCCGGGTTAAG-TCCCGAAGGCAAT
1 TCCGGGCTAAGACCGAAGGC-TTTGTGCTAAGTGACCAAATCCGGACTAAGAT-CCGAAGGCAAT
*
39442 TGTGCGAGTTACTATAA-CCGGGCTATGTCCCGAA-GCATTTGAACGAG
64 TGTGCGAG-TACTA-AATCCGGGCTAAGTCCCGAAGGCATTTGAACGAG
39489 TAGCTATATC
Statistics
Matches: 94, Mismatches: 12, Indels: 8
0.82 0.11 0.07
Matches are distributed among these distances:
117 1 0.01
118 65 0.69
119 26 0.28
120 2 0.02
ACGTcount: A:0.26, C:0.21, G:0.28, T:0.25
Consensus pattern (118 bp):
TCCGGGCTAAGACCGAAGGCTTTGTGCTAAGTGACCAAATCCGGACTAAGATCCGAAGGCAATTG
TGCGAGTACTAAATCCGGGCTAAGTCCCGAAGGCATTTGAACGAGATACTAAT
Found at i:42398 original size:43 final size:42
Alignment explanation
Indices: 42267--42399 Score: 123
Period size: 42 Copynumber: 3.2 Consensus size: 42
42257 AGACATCGTG
* *
42267 TAAGACCGTGTCTAGGACACAGGCCTTGATTGAGATTTACGTA
1 TAAGACCGTGTTTAGGACACAGGCCTCGATTGAGA-TTACGTA
* * * * *
42310 TAAGACC-AG-TTGGGACATC-GGCATCGTATCT--GATTTCGTG
1 TAAGACCGTGTTTAGGACA-CAGGCCTCG-AT-TGAGATTACGTA
42350 TAAGACCGTGTTTAGGACACAGGCCTCGATTGAGATATACGTA
1 TAAGACCGTGTTTAGGACACAGGCCTCGATTGAGAT-TACGTA
42393 TAAGACC
1 TAAGACC
42400 ATGTCTGGGA
Statistics
Matches: 69, Mismatches: 12, Indels: 18
0.70 0.12 0.18
Matches are distributed among these distances:
40 13 0.19
41 17 0.25
42 20 0.29
43 19 0.28
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.27
Consensus pattern (42 bp):
TAAGACCGTGTTTAGGACACAGGCCTCGATTGAGATTACGTA
Found at i:42411 original size:43 final size:42
Alignment explanation
Indices: 42267--42411 Score: 129
Period size: 43 Copynumber: 3.5 Consensus size: 42
42257 AGACATCGTG
* *
42267 TAAGACCGTGTCTAGGACACAGGCCTTGATTGAGATTTACGTA
1 TAAGACCATGTCTAGGACACAGGCCTCGATTGAGA-TTACGTA
* * * *
42310 TAAGACCA-GT-TGGGACATC-GGCATCGTATCT--GATTTCGTG
1 TAAGACCATGTCTAGGACA-CAGGCCTCG-AT-TGAGATTACGTA
* *
42350 TAAGACCGTGTTTAGGACACAGGCCTCGATTGAGATATACGTA
1 TAAGACCATGTCTAGGACACAGGCCTCGATTGAGAT-TACGTA
*
42393 TAAGACCATGTCTGGGACA
1 TAAGACCATGTCTAGGACA
42412 TCGACATCGT
Statistics
Matches: 79, Mismatches: 14, Indels: 18
0.71 0.13 0.16
Matches are distributed among these distances:
40 13 0.16
41 18 0.23
42 20 0.25
43 28 0.35
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.27
Consensus pattern (42 bp):
TAAGACCATGTCTAGGACACAGGCCTCGATTGAGATTACGTA
Found at i:42464 original size:85 final size:83
Alignment explanation
Indices: 42265--42464 Score: 283
Period size: 85 Copynumber: 2.4 Consensus size: 83
42255 AGAGACATCG
* *
42265 TGTAAGACCGTGTCTAGGACACAGGCCTTGATTGAGATTTACGTATAAGACCAGTTGGGACATCG
1 TGTAAGACCGTGTCTAGGACACAGGCCTCGATTGAGATATACGTATAAGACCAGTTGGGACATCG
* *
42330 GCATCGTATCTGATTTCG
66 ACATCGTATCTGATTTCA
*
42348 TGTAAGACCGTGTTTAGGACACAGGCCTCGATTGAGATATACGTATAAGACCATGTCTGGGACAT
1 TGTAAGACCGTGTCTAGGACACAGGCCTCGATTGAGATATACGTATAAGACCA-GT-TGGGACAT
*
42413 CGACATCGTATCTGGTTTCA
64 CGACATCGTATCTGATTTCA
* * * * *
42433 TGTAAAACCCTGTCTGGGACAGAGGCATCGAT
1 TGTAAGACCGTGTCTAGGACACAGGCCTCGAT
42465 ATTGAATTAC
Statistics
Matches: 103, Mismatches: 12, Indels: 2
0.88 0.10 0.02
Matches are distributed among these distances:
83 50 0.49
84 2 0.02
85 51 0.50
ACGTcount: A:0.27, C:0.20, G:0.26, T:0.28
Consensus pattern (83 bp):
TGTAAGACCGTGTCTAGGACACAGGCCTCGATTGAGATATACGTATAAGACCAGTTGGGACATCG
ACATCGTATCTGATTTCA
Found at i:42482 original size:85 final size:83
Alignment explanation
Indices: 42265--42503 Score: 239
Period size: 85 Copynumber: 2.8 Consensus size: 83
42255 AGAGACATCG
* * * * * *
42265 TGTAAGACCGTGTCTAGGACACAGGCCTTGATTGAGATTTACGTATAAGACCAGTTGGGACATCG
1 TGTAAAACCCTGTCTAGGACACAGGCATCGATTGAGATATACATATAAGACCAGTTGGGACATCG
* *
42330 GCATCGTATCTGATTTCG
66 ACATCGTATCTGATTTCA
* * * * *
42348 TGTAAGACCGTGTTTAGGACACAGGCCTCGATTGAGATATACGTATAAGACCATGTCTGGGACAT
1 TGTAAAACCCTGTCTAGGACACAGGCATCGATTGAGATATACATATAAGACCA-GT-TGGGACAT
*
42413 CGACATCGTATCTGGTTTCA
64 CGACATCGTATCTGATTTCA
* * * *
42433 TGTAAAACCCTGTCTGGGACAGAGGCATCGATATTGA-AT-TACATGTAAGACCACATTCGGGAC
1 TGTAAAACCCTGTCTAGGACACAGGCATCG--ATTGAGATATACATATAAGACCA-GTT-GGGAC
*
42496 GTCGACAT
62 ATCGACAT
42504 TATACTTGTT
Statistics
Matches: 134, Mismatches: 17, Indels: 8
0.84 0.11 0.05
Matches are distributed among these distances:
83 50 0.37
84 3 0.02
85 74 0.55
86 2 0.01
87 5 0.04
ACGTcount: A:0.28, C:0.20, G:0.25, T:0.27
Consensus pattern (83 bp):
TGTAAAACCCTGTCTAGGACACAGGCATCGATTGAGATATACATATAAGACCAGTTGGGACATCG
ACATCGTATCTGATTTCA
Done.