Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1446
Parameters: 2 7 7 80 10 50 1000
Length:  45332

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2773--2882
40
2.8
40
79
6
116
24
28
21
25
1.99
3182--3255
29
2.6
29
89
4
105
25
32
16
25
1.96
3237--3373
43
3.4
42
89
10
207
24
35
16
24
1.95
5365--5931
47
12.1
47
94
0
902
28
30
8
32
1.87
13746--13771
13
2.0
13
100
0
52
15
38
30
15
1.88
23799--23892
47
2.0
47
100
0
188
34
21
21
23
1.97
31702--31862
56
2.9
56
77
3
180
27
14
24
32
1.94
34244--34615
48
7.9
46
73
12
199
28
18
29
24
1.98
40549--41100
47
11.7
47
94
0
935
32
8
29
29
1.87
41219--41297
37
2.1
37
92
0
131
25
18
30
25
1.98
42508--42819
40
7.8
40
88
0
462
26
21
25
26
1.99
44452--44622
85
2.0
85
87
2
245
37
9
27
25
1.87

Tables:   1

The End!