Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1670
Parameters: 2 7 7 80 10 50 1000
Length:  67690

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4139--4376
118
2.0
118
100
0
476
26
19
12
41
1.87
13905--13948
10
4.4
10
81
18
56
47
11
0
40
1.39
13898--13940
19
2.2
20
91
4
70
48
6
0
44
1.29
16651--16691
21
2.0
21
95
0
73
36
17
4
41
1.71
20895--20939
23
2.0
23
82
8
56
37
2
24
35
1.68
26494--26571
25
3.1
25
61
14
61
16
12
10
60
1.59
26486--26614
50
2.6
50
90
2
190
18
13
10
56
1.66
35791--35821
15
2.1
15
100
0
62
35
19
0
45
1.51
37849--37875
11
2.5
11
100
0
54
22
7
18
51
1.70
39270--39464
93
2.1
92
88
4
286
44
4
4
47
1.41
39497--39530
17
2.0
17
94
0
59
44
5
0
50
1.26
39497--39535
17
2.4
16
87
8
53
43
5
0
51
1.24
39501--39540
17
2.3
18
83
12
57
47
5
0
47
1.24
39620--39754
15
8.9
15
67
24
70
42
2
3
51
1.32
39496--39714
120
1.8
119
89
6
345
40
3
5
50
1.44
39722--39763
15
2.7
16
82
14
52
45
0
2
52
1.13
39863--39897
18
2.0
17
88
5
52
45
0
0
54
0.99
40097--40135
16
2.4
16
86
0
51
28
33
2
35
1.71
40110--40166
16
3.6
16
92
0
78
33
35
0
31
1.58
40979--41143
87
1.9
87
91
0
267
38
21
18
21
1.94
55177--55255
40
2.0
40
87
0
113
36
3
10
49
1.55

Tables:   1

The End!