Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1495
Parameters: 2 7 7 80 10 50 1000
Length:  36417

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
368--475
41
2.6
43
90
8
163
24
15
34
25
1.95
416--524
57
1.9
57
94
3
195
21
14
38
25
1.91
2168--2497
47
7.1
47
91
2
504
27
29
9
33
1.88
2168--2497
93
3.5
94
91
1
504
27
29
9
33
1.88
2411--2481
23
3.1
23
62
22
58
30
29
5
33
1.81
10060--10181
58
2.1
59
84
4
158
24
16
22
36
1.94
10624--10992
189
2.0
186
81
5
431
30
23
23
22
1.99
12016--12178
29
5.7
29
82
2
170
25
32
15
26
1.95
14560--14781
40
5.6
40
80
2
216
26
23
25
24
2.00
19134--19212
37
2.1
37
90
0
122
25
29
18
26
1.98
19331--19743
47
8.7
47
92
1
657
29
30
8
32
1.87
22676--22987
40
7.8
40
88
0
471
25
25
21
26
2.00
24197--24275
37
2.1
37
92
0
131
25
30
18
25
1.98
24394--24663
47
5.7
47
91
0
407
28
30
8
32
1.87
30603--30652
26
1.9
26
88
8
75
72
2
22
4
1.12
32535--32728
88
2.2
85
83
13
232
33
8
27
30
1.86
32535--32747
48
4.8
44
79
15
192
33
7
27
30
1.85
32535--32747
89
2.4
91
81
15
248
33
7
27
30
1.85
33070--33147
35
2.2
38
82
13
94
23
19
28
29
1.98
34322--34632
40
7.8
40
78
13
313
26
20
27
25
1.99

Tables:   1

The End!