Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3520
Parameters: 2 7 7 80 10 50 1000
Length:  35368

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5536--5597
29
2.1
31
87
6
92
29
0
30
40
1.57
8908--8960
23
2.4
22
76
20
56
9
18
1
69
1.25
12662--12714
23
2.4
22
76
20
56
9
18
1
69
1.25
16015--16039
13
1.9
13
100
0
50
36
16
32
16
1.90
17140--17236
30
3.2
30
76
2
97
28
14
26
29
1.95
19272--19310
11
3.6
11
82
6
53
33
30
2
33
1.72
19267--19312
21
2.1
23
88
8
69
32
34
2
30
1.70
25432--25514
30
2.7
30
81
9
89
12
21
1
65
1.33
25583--25631
21
2.3
20
80
10
53
2
18
4
75
1.06
25583--25628
15
3.1
14
84
12
56
2
17
4
76
1.06
26553--26593
11
3.9
10
87
9
55
17
2
7
73
1.17
26552--26593
21
2.0
21
90
4
66
16
2
7
73
1.15
28124--28170
17
2.7
18
80
6
60
36
4
14
44
1.65
30094--30191
28
3.5
28
90
2
135
31
28
13
26
1.94

Tables:   1

The End!