Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1665
Parameters: 2 7 7 80 10 50 1000
Length:  62063

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5830--6054
40
5.7
39
85
4
263
26
28
22
23
1.99
10666--10773
38
2.8
38
87
0
153
10
23
30
36
1.88
11233--11273
21
2.0
21
85
9
57
31
4
19
43
1.72
18303--18341
20
2.0
20
89
0
60
28
0
0
71
0.86
25856--25904
25
2.0
25
83
0
62
40
16
8
34
1.78
36661--36694
18
1.9
17
94
5
59
64
0
8
26
1.22
36996--37042
19
2.5
19
89
0
67
40
2
17
40
1.61
38604--38647
23
2.0
22
81
4
52
43
0
20
36
1.52
50383--50468
40
2.2
40
100
0
172
51
22
0
26
1.48
52798--53003
56
3.7
57
87
5
262
25
13
29
32
1.94
52823--53003
28
6.5
28
93
1
267
25
13
28
31
1.94
59966--60144
27
6.6
27
94
2
277
26
13
28
30
1.95
59966--60144
55
3.3
54
93
0
286
26
13
28
30
1.95
59966--60144
82
2.2
82
90
2
279
26
13
28
30
1.95

Tables:   1

The End!