Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2113
Parameters: 2 7 7 80 10 50 1000
Length:  61744

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3384--3607
79
2.8
78
83
9
274
25
27
22
25
2.00
3384--3607
40
5.7
40
86
8
275
25
27
22
25
2.00
9579--9652
29
2.6
29
89
4
105
25
16
32
25
1.96
11868--11974
27
3.9
27
84
11
130
17
25
22
34
1.96
11868--11976
54
2.0
54
85
7
150
17
25
22
34
1.95
18839--18950
27
4.1
27
82
3
118
17
23
23
35
1.95
18839--18950
54
2.1
54
86
3
154
17
23
23
35
1.95
22562--22586
13
1.9
13
100
0
50
16
20
32
32
1.94
23976--24130
42
3.7
42
76
6
143
32
20
16
30
1.94
25936--26086
41
3.7
40
82
0
149
37
13
26
21
1.91
25971--26081
41
2.7
41
86
5
154
38
13
25
22
1.91
27155--27190
17
2.1
17
100
0
72
27
22
16
33
1.95
29718--29767
21
2.4
21
86
0
73
12
28
34
26
1.92
33314--33368
2
27.5
2
92
0
92
3
0
45
50
1.19
38853--39044
41
4.7
41
76
7
158
35
15
26
22
1.94
47395--47455
30
2.0
30
83
0
77
31
22
8
37
1.84
51843--51903
30
2.0
30
83
0
77
31
22
8
37
1.84
60563--60833
139
1.9
139
100
0
542
17
25
23
33
1.96

Tables:   1

The End!