Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3817
Parameters: 2 7 7 80 10 50 1000
Length:  60377

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7053--7224
47
3.8
46
76
16
180
20
20
30
29
1.97
15385--15442
31
1.9
30
96
3
107
29
29
22
18
1.98
15412--15540
46
2.7
49
80
16
155
28
28
20
21
1.98
15415--15556
46
3.0
44
76
15
128
28
28
19
22
1.98
19575--19648
22
3.3
22
71
17
80
32
12
29
25
1.92
19551--19740
46
4.1
47
86
3
262
32
10
28
28
1.90
19551--19740
91
2.1
93
86
4
260
32
10
28
28
1.90
19710--19839
47
2.6
51
83
11
173
36
6
26
31
1.81
19993--20104
37
3.0
36
90
2
170
22
16
33
27
1.96
20401--20756
47
7.6
47
91
4
531
32
8
29
29
1.87
28303--28524
46
4.8
46
80
9
272
30
28
19
21
1.98
40275--40327
26
2.0
26
92
0
88
35
22
22
18
1.95
42323--42437
55
2.1
55
93
0
194
31
25
15
27
1.96
45050--45075
13
2.0
13
100
0
52
30
15
23
30
1.95
45062--45187
43
2.9
42
82
8
139
26
17
24
31
1.97
53909--54151
40
6.1
40
91
2
373
29
26
20
23
1.99

Tables:   1

The End!