Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2176
Parameters: 2 7 7 80 10 50 1000
Length:  59263

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1133--1201
15
4.6
15
83
0
84
11
17
13
57
1.64
1124--1211
30
3.0
30
81
8
99
10
17
15
56
1.66
3593--3766
45
3.8
46
77
13
196
21
21
28
28
1.99
3589--3758
92
1.8
92
91
2
279
21
21
28
27
1.99
25031--25060
12
2.5
12
94
0
51
6
23
40
30
1.80
29734--29804
26
2.7
26
75
18
67
9
5
8
76
1.16
29750--29798
20
2.6
17
81
15
53
12
0
10
77
0.99
32166--32213
21
2.2
22
82
14
64
45
0
18
35
1.50
32873--32935
29
2.2
29
91
0
99
36
7
28
26
1.85
37459--37528
25
2.8
25
86
0
95
25
21
24
28
1.99
37617--37788
27
6.0
27
81
11
191
23
20
21
34
1.97
37662--37735
36
2.1
36
92
0
121
20
16
25
37
1.93
37635--37762
63
2.0
63
92
0
211
21
20
23
35
1.96
37616--37788
90
1.9
90
90
0
274
23
20
21
34
1.97
37777--37931
27
5.7
28
83
6
149
31
6
20
41
1.77
37807--37931
55
2.3
54
84
4
153
31
6
19
43
1.76
37777--37931
82
1.9
81
82
6
197
31
6
20
41
1.77
37832--37945
27
4.2
27
85
5
104
30
6
22
40
1.78
37924--38132
81
2.6
81
91
0
328
36
7
24
31
1.84
37924--38107
27
6.8
27
94
0
305
37
8
25
29
1.84
37924--38132
27
7.7
27
92
0
247
36
7
24
31
1.84
42468--42568
50
2.0
50
100
0
202
23
23
13
38
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45596--45819
40
5.6
40
89
1
308
28
26
21
23
1.99
50915--50948
15
2.3
15
100
0
68
26
29
11
32
1.92

Tables:   1

The End!