Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1295
Parameters: 2 7 7 80 10 50 1000
Length:  57692

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9187--9256
28
2.5
28
90
4
106
27
12
27
32
1.93
13267--13310
22
2.0
22
86
0
61
38
0
4
56
1.20
14994--15082
45
2.0
45
100
0
178
22
22
6
48
1.74
21757--21789
16
2.1
16
94
0
57
48
30
6
15
1.69
25348--25689
48
7.0
48
96
2
621
35
6
26
30
1.81
25825--25963
37
3.8
37
93
3
217
26
17
28
26
1.98
25835--25981
37
4.0
37
90
0
213
24
17
29
28
1.97
27280--27376
29
3.5
28
79
6
81
28
15
25
29
1.96
27293--27377
29
3.0
29
84
1
109
27
16
25
30
1.97
29164--29193
6
5.0
6
91
0
51
0
20
0
80
0.72
30201--30395
27
7.2
27
85
0
255
25
10
18
45
1.82
30201--30402
81
2.5
81
87
0
287
24
10
18
46
1.81
33436--33545
29
3.8
29
73
5
89
25
15
33
25
1.95
38679--38849
48
3.6
49
88
4
251
28
26
18
26
1.98
42843--42912
28
2.5
28
88
9
99
27
14
27
31
1.95
50627--50696
28
2.5
28
88
9
99
27
14
27
31
1.95
54879--55354
47
10.1
48
83
9
570
31
12
29
26
1.93
54879--55354
141
3.3
143
85
8
639
31
12
29
26
1.93
54879--55322
190
2.4
190
85
8
590
31
13
29
25
1.93
55187--55262
24
3.2
24
62
23
61
28
13
32
25
1.93
55561--55738
36
4.9
37
87
8
260
25
18
30
25
1.98
56789--56868
25
3.3
25
66
16
69
30
27
8
33
1.87

Tables:   1

The End!